The University of the South Bohemia (ELIXIR CZ) would like to invite you to the online hands-on workshop focused on UniCatDB.UnicatDB is the service platform developed under the ELIXIR research infrastructure for more than two years representing robust unified solution for species occurrence evidence and Life Science collections with full user-defined data schema aiming among others at data publication shapshots and future data data FAIRification.The ambition is to provide you new, flexible and secure solution for your data, with easy-to-use web interface. Aside the human-friendly graphical interface there is also powerful REST API. The complete solution also contains Python libraries for your own scripts and tools.After the workshop you will know how to use UniCatDB, how to define your specific schema to store your data and how to access and process your data from python programs.Date: 4th Dec 2020Preliminary Workshop agenda:9:00 9:45 UniCatDB introductionElixir project, UniCatDB overview, Web Interface, Solution Architecture9:45 10:30 Build your own schemaStep-by-step showcase, individual work, from csv and excel to databaseCoffe break11:00 11:45 Create your PY scriptStep-by-step showcase, individual work11:45 12:00 Q&ARegistrationRegistration is closed.The link to the online meeting will be send to those registered before the event.Thank you and looking forward to meet you on the workshop.On behalf of the team of the University of the South BohemiaRudolf Vohnout
The ELIXIR Training Platform is pleased to announce a Train the Trainer (TtT) event online, in collaboration with ELIXIR-CZ and UCT Prague.InstructorsLoredana Le Pera (ELIXIR-IT Deputy Training Coordinator, IBIOM/IBPM-CNR, IT)Jessica Lindvall (ELIXIR-SE T
projít na článekFollowing success of the ELIXIR organised online RNA-seq courses, a workshop will take place at IOCB on June 1st and 2nd. The course will be delivered to the researchers by Eija Korpelainen from CSC ELIXIR Finland Node. The course will take place in Mult
projít na článekPrankWebMarian Novotný from UKPrankWeb (https://prankweb.cz/) is a tool predicting ligand binding sites on 3D structures using machine learning algorithms. The tool is integrated into the PDBe-KB. We will present both its current state and its future deve
projít na článekELIXIR and Galaxy ProjectMartin Čech from IOCBGalaxy is a tool that assists scientists with making their software pipelines reproducible, portable, and easy to share. This session presents a 10,000 feet overview of the Galaxy Project what it is, what it
projít na článekPhyloFisher: A phylogenomic package for resolving eukaryotic relationshipsMartin Kolisko, Matthew W Brown from BC, JUMeet us online every friday morning to explore the portfolio of ELIXIR CZ tools and services at https://global.gotomeeting.com/join/508817
projít na článek